Gene detail information of Glyur000066s00006263.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G28510.1 | 4.00E-34 | Dof-type zinc finger DNA-binding family protein |
| NR | XP_003539737.1 | 5.99E-126 | PREDICTED: dof zinc finger protein DOF2.1-like [Glycine max] |
| Swissprot | tr|Q8LE43|DOF21_ARATH | 3.00E-48 | Dof zinc finger protein DOF2.1 |
| trEMBL | tr|I1LR01|I1LR01_SOYBN | 2.00E-126 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G07710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00066 | 382246 | 384343 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2C2-Dof |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000066s00006263.1 | PF02701.10 | zf-Dof | 36 | 97 | 4.70E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.624 |
| SRR1783600 | control | 7.671 |
| SRR1783602 | moderate drought stress | 7.572 |
| SRR1811619 | moderate drought stress | 7.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.558 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.274 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.780 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.658 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.158 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.960 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.641 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 30.396 |
| SRR2868004 | Drought Stress(Tissue:root) | 25.747 |
| SRR2967015 | Control (Tissue:root) | 27.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.364 |
| SRR9715740 | Leave | 1.359 |
| SRR9715741 | Leave | 2.893 |
| SRR9715739 | Root | 2.688 |
| SRR9715742 | Root | 9.357 |
| SRR9715743 | Root | 6.546 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.692 |
| SRR8749028 | MeJA induced 9h | 0.046 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.943 |
| SRR8400027 | Control-Root | 19.028 |