Gene detail information of Glyur000067s00006348.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G16800.11.00E-107ATP-dependent caseinolytic (Clp) protease/crotonase family protein
NRXP_006579373.10PREDICTED: uncharacterized protein LOC100526933 isoform X1 [Glycine max]
COGYP_007422571.11.00E-76Enoyl-CoA hydratase/isomerase [Bacillus thuringiensis serovar kurstaki str. HD73]
Swissprottr|Q39659|MFPA_CUCSA3.00E-273-hydroxyacyl-CoA dehydrogenase
trEMBLtr|I1K0U5|I1K0U5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G05200.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000676195965706-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05607AUH EC:4.2.1.18 Valine, leucine and isoleucine degradation map00280


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000067s00006348.1PF00378.15ECH643055.10E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.191
SRR1783600control13.255
SRR1783602moderate drought stress17.001
SRR1811619moderate drought stress17.075

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.943
DRR006520Root Summer glycyrrhizin high producing strain16.878
DRR006521Root Winter glycyrrhizin high producing strain11.047
DRR006522Root Winter glycyrrhizin high producing strain10.359
DRR006523Root Summer glycyrrhizin low producing strain17.034
DRR006524Root Summer glycyrrhizin low producing strain17.185
DRR006525Leaf Summer glycyrrhizin high producing strain15.966
DRR006526Leaf Summer glycyrrhizin high producing strain16.207

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.391
SRR2868004Drought Stress(Tissue:root)27.016
SRR2967015Control (Tissue:root)28.166

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.200
SRR9715740Leave16.262
SRR9715741Leave14.395
SRR9715739Root6.635
SRR9715742Root10.947
SRR9715743Root11.118

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.472
SRR8749028MeJA induced 9h14.239
SRR8749029MeJA induced 9h13.660
SRR8749030Uninduced9.988
SRR8749031Uninduced4.446
SRR8749032Uninduced4.737

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.673
SRR8400027Control-Root21.972

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved