Gene detail information of Glyur000067s00006360.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G17570.35.00E-119GATA transcription factor 26
NRXP_004508957.10PREDICTED: GATA transcription factor 26-like [Cicer arietinum]
Swissprottr|Q8W4H1|GAT26_ARATH1.00E-145GATA transcription factor 26
trEMBLtr|I1K0V3|I1K0V3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G05320.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00067127150133010+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-GATA


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0008270  zinc ion binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000067s00006360.1PF00320.22GATA7411.40E-13
Glyur000067s00006360.1PF13919.1ASXH2884051.80E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.787
SRR1783600control9.927
SRR1783602moderate drought stress8.329
SRR1811619moderate drought stress8.238

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.667
DRR006520Root Summer glycyrrhizin high producing strain18.457
DRR006521Root Winter glycyrrhizin high producing strain12.984
DRR006522Root Winter glycyrrhizin high producing strain12.854
DRR006523Root Summer glycyrrhizin low producing strain15.521
DRR006524Root Summer glycyrrhizin low producing strain15.397
DRR006525Leaf Summer glycyrrhizin high producing strain5.027
DRR006526Leaf Summer glycyrrhizin high producing strain4.933

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.552
SRR2868004Drought Stress(Tissue:root)15.576
SRR2967015Control (Tissue:root)13.394

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.202
SRR9715740Leave7.747
SRR9715741Leave11.385
SRR9715739Root4.190
SRR9715742Root11.039
SRR9715743Root10.135

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.294
SRR8749028MeJA induced 9h32.740
SRR8749029MeJA induced 9h34.762
SRR8749030Uninduced19.071
SRR8749031Uninduced30.527
SRR8749032Uninduced37.480

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.865
SRR8400027Control-Root17.987

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved