Gene detail information of Glyur000067s00006366.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G07440.23.00E-168glutamate dehydrogenase 2
NRXP_004508961.10PREDICTED: glutamate dehydrogenase A-like [Cicer arietinum]
COGYP_004270382.16.00E-126glutamate dehydrogenase [Planctomyces brasiliensis DSM 5305]
Swissprottr|Q38946|DHE2_ARATH0Glutamate dehydrogenase 2
trEMBLtr|I1J9Q7|I1J9Q7_SOYBN0Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00067160636164501-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00261GLUD1_2, gdhA EC:1.4.1.3 Carbon metabolism map01200
Nitrogen metabolismmap00910
Alanine, aspartate and glutamate metabolismmap00250
Arginine biosynthesismap00220
D-Glutamine and D-glutamate metabolismmap00471
Proximal tubule bicarbonate reclamationmap04964


Gene Ontology

biological_process

GO:0006520  cellular amino acid metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000067s00006366.2PF02812.13ELFV_dehydrog_N331607.70E-46
Glyur000067s00006366.2PF00208.16ELFV_dehydrog1762957.30E-30
Glyur000067s00006366.2PF00208.16ELFV_dehydrog3013887.50E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.442
SRR1783600control14.402
SRR1783602moderate drought stress6.177
SRR1811619moderate drought stress6.099

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.437
DRR006520Root Summer glycyrrhizin high producing strain32.881
DRR006521Root Winter glycyrrhizin high producing strain7.421
DRR006522Root Winter glycyrrhizin high producing strain7.260
DRR006523Root Summer glycyrrhizin low producing strain69.102
DRR006524Root Summer glycyrrhizin low producing strain68.577
DRR006525Leaf Summer glycyrrhizin high producing strain1.228
DRR006526Leaf Summer glycyrrhizin high producing strain1.124

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.386
SRR2868004Drought Stress(Tissue:root)12.697
SRR2967015Control (Tissue:root)15.168

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.285
SRR9715740Leave6.950
SRR9715741Leave11.255
SRR9715739Root60.100
SRR9715742Root52.662
SRR9715743Root54.262

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h248.035
SRR8749028MeJA induced 9h134.465
SRR8749029MeJA induced 9h100.674
SRR8749030Uninduced128.118
SRR8749031Uninduced26.778
SRR8749032Uninduced46.107

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.808
SRR8400027Control-Root23.776

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved