Gene detail information of Glyur000067s00006374.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33950.15.00E-144Protein kinase superfamily protein
NRXP_006600860.10PREDICTED: serine/threonine-protein kinase SAPK3-like isoform X2 [Glycine max]
COGYP_004862245.11.00E-26protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
Swissprottr|P0C5D6|SAPK3_ORYSJ0Serine/threonine-protein kinase SAPK3
trEMBLtr|I1MV84|I1MV84_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G15860.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00067214532217926-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14498SNRK2 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000067s00006374.1PF00069.20Pkinase52618.40E-70


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.526
SRR1783600control27.795
SRR1783602moderate drought stress32.840
SRR1811619moderate drought stress32.300

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain32.638
DRR006520Root Summer glycyrrhizin high producing strain32.711
DRR006521Root Winter glycyrrhizin high producing strain41.270
DRR006522Root Winter glycyrrhizin high producing strain41.138
DRR006523Root Summer glycyrrhizin low producing strain42.568
DRR006524Root Summer glycyrrhizin low producing strain42.558
DRR006525Leaf Summer glycyrrhizin high producing strain25.517
DRR006526Leaf Summer glycyrrhizin high producing strain25.265

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)100.668
SRR2868004Drought Stress(Tissue:root)111.028
SRR2967015Control (Tissue:root)84.586

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave41.800
SRR9715740Leave48.551
SRR9715741Leave44.791
SRR9715739Root12.763
SRR9715742Root24.918
SRR9715743Root27.145

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h94.855
SRR8749028MeJA induced 9h59.703
SRR8749029MeJA induced 9h98.676
SRR8749030Uninduced77.800
SRR8749031Uninduced115.620
SRR8749032Uninduced106.885

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root94.116
SRR8400027Control-Root83.836

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved