Gene detail information of Glyur000067s00006395.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G47040.10lon protease 2
NRKEH31576.10lon-related ATP-dependent protease, putative [Medicago truncatula]
COGYP_003269175.10ATP-dependent protease La [Haliangium ochraceum DSM 14365]
Swissprottr|O04979|LONP2_SPIOL0Lon protease homolog 2, peroxisomal {ECO:0000255|HAMAP-Rule:MF_03121}
trEMBLtr|A0A072UQE3|A0A072UQE3_MEDTR0Lon protease homolog 2, peroxisomal {ECO:0000256|HAMAP-Rule:MF_03121}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00067344272357164+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01338lon EC:3.4.21.53 Cell cycle - Caulobacter map04112


Gene Ontology

biological_process

GO:0006508  proteolysis

GO:0006515  misfolded or incompletely synthesized protein catabolic process

GO:0030163  protein catabolic process


molecular_function

GO:0004176  ATP-dependent peptidase activity

GO:0004252  serine-type endopeptidase activity

GO:0004857  enzyme inhibitor activity

GO:0005524  ATP binding

GO:0030599  pectinesterase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000067s00006395.1PF02190.11LON112407.60E-32
Glyur000067s00006395.1PF00004.24AAA3915285.50E-22
Glyur000067s00006395.1PF05362.8Lon_C6568622.80E-76
Glyur000067s00006395.1PF04043.10PMEI88410151.30E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.920
SRR1783600control15.909
SRR1783602moderate drought stress19.515
SRR1811619moderate drought stress18.905

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.406
DRR006520Root Summer glycyrrhizin high producing strain34.431
DRR006521Root Winter glycyrrhizin high producing strain47.911
DRR006522Root Winter glycyrrhizin high producing strain47.055
DRR006523Root Summer glycyrrhizin low producing strain33.050
DRR006524Root Summer glycyrrhizin low producing strain33.163
DRR006525Leaf Summer glycyrrhizin high producing strain23.885
DRR006526Leaf Summer glycyrrhizin high producing strain24.057

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.234
SRR2868004Drought Stress(Tissue:root)50.267
SRR2967015Control (Tissue:root)59.609

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave32.650
SRR9715740Leave31.085
SRR9715741Leave46.377
SRR9715739Root8.635
SRR9715742Root33.965
SRR9715743Root33.504

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.285
SRR8749028MeJA induced 9h31.074
SRR8749029MeJA induced 9h20.001
SRR8749030Uninduced18.144
SRR8749031Uninduced12.527
SRR8749032Uninduced14.200

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.298
SRR8400027Control-Root36.722

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved