Gene detail information of Glyur000068s00006807.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46410.1 | 2.00E-12 | Homeodomain-like superfamily protein |
| NR | ACU15594.1 | 1.33E-33 | unknown [Glycine max] |
| Swissprot | tr|O22059|CPC_ARATH | 8.00E-16 | Transcription factor CPC |
| trEMBL | tr|C6T1X2|C6T1X2_SOYBN | 5.00E-34 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G10790.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00068 | 19634 | 21055 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000068s00006807.1 | PF00249.26 | Myb_DNA-binding | 25 | 66 | 1.90E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.325 |
| SRR1783600 | control | 16.395 |
| SRR1783602 | moderate drought stress | 15.342 |
| SRR1811619 | moderate drought stress | 15.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.761 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.785 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.120 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.118 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.595 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.596 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.719 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.856 |
| SRR2868004 | Drought Stress(Tissue:root) | 36.799 |
| SRR2967015 | Control (Tissue:root) | 20.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 34.779 |
| SRR9715740 | Leave | 13.547 |
| SRR9715741 | Leave | 21.868 |
| SRR9715739 | Root | 14.354 |
| SRR9715742 | Root | 15.374 |
| SRR9715743 | Root | 12.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.308 |
| SRR8749028 | MeJA induced 9h | 0.218 |
| SRR8749029 | MeJA induced 9h | 0.198 |
| SRR8749030 | Uninduced | 0.413 |
| SRR8749031 | Uninduced | 0.083 |
| SRR8749032 | Uninduced | 0.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 66.414 |
| SRR8400027 | Control-Root | 54.909 |