Gene detail information of Glyur000068s00006829.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05180.10NAD(P)-binding Rossmann-fold superfamily protein
NRXP_004515094.10PREDICTED: NEDD8-activating enzyme E1 regulatory subunit-like [Cicer arietinum]
COGYP_006438923.15.00E-10UBA/THIF-type NAD/FAD binding protein [Turneriella parva DSM 21527]
Swissprottr|P42744|ULA1_ARATH0NEDD8-activating enzyme E1 regulatory subunit {ECO:0000305}
trEMBLtr|I3SW23|I3SW23_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK44465.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00068122835128022+


Gene family

Gene familysubfamily
Ubiquitin FamilyThiF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0045116  protein neddylation


molecular_function

GO:0008641  small protein activating enzyme activity

GO:0019781  NEDD8 activating enzyme activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000068s00006829.1PF00899.16ThiF251574.50E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.248
SRR1783600control23.423
SRR1783602moderate drought stress17.294
SRR1811619moderate drought stress17.365

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain40.706
DRR006520Root Summer glycyrrhizin high producing strain40.408
DRR006521Root Winter glycyrrhizin high producing strain17.174
DRR006522Root Winter glycyrrhizin high producing strain16.542
DRR006523Root Summer glycyrrhizin low producing strain26.736
DRR006524Root Summer glycyrrhizin low producing strain26.807
DRR006525Leaf Summer glycyrrhizin high producing strain23.597
DRR006526Leaf Summer glycyrrhizin high producing strain23.727

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)47.010
SRR2868004Drought Stress(Tissue:root)42.231
SRR2967015Control (Tissue:root)40.306

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.940
SRR9715740Leave24.484
SRR9715741Leave26.362
SRR9715739Root7.651
SRR9715742Root27.213
SRR9715743Root23.087

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.795
SRR8749028MeJA induced 9h15.836
SRR8749029MeJA induced 9h17.765
SRR8749030Uninduced9.068
SRR8749031Uninduced4.870
SRR8749032Uninduced4.997

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.753
SRR8400027Control-Root44.003

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved