Gene detail information of Glyur000068s00006831.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05170.2 | 0 | Galactosyltransferase family protein |
| NR | KEH29683.1 | 0 | beta-1,3-galactosyltransferase-like protein [Medicago truncatula] |
| Swissprot | tr|A8MRC7|B3GT2_ARATH | 0 | Probable beta-1,3-galactosyltransferase 2 |
| trEMBL | tr|A0A072UKR4|A0A072UKR4_MEDTR | 0 | Beta-1,3-galactosyltransferase-like protein {ECO:0000313|EMBL:KEH29683.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00068 | 140603 | 144290 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000068s00006831.1 | PF13334.1 | DUF4094 | 17 | 112 | 1.40E-27 |
| Glyur000068s00006831.1 | PF01762.16 | Galactosyl_T | 152 | 349 | 3.00E-51 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.873 |
| SRR1783600 | control | 29.974 |
| SRR1783602 | moderate drought stress | 30.024 |
| SRR1811619 | moderate drought stress | 29.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.970 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.468 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.777 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.199 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.420 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.541 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.901 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 34.090 |
| SRR2868004 | Drought Stress(Tissue:root) | 23.959 |
| SRR2967015 | Control (Tissue:root) | 29.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 20.460 |
| SRR9715740 | Leave | 14.866 |
| SRR9715741 | Leave | 18.264 |
| SRR9715739 | Root | 9.635 |
| SRR9715742 | Root | 31.100 |
| SRR9715743 | Root | 25.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.574 |
| SRR8749028 | MeJA induced 9h | 7.927 |
| SRR8749029 | MeJA induced 9h | 8.758 |
| SRR8749030 | Uninduced | 16.880 |
| SRR8749031 | Uninduced | 11.543 |
| SRR8749032 | Uninduced | 10.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 40.770 |
| SRR8400027 | Control-Root | 37.032 |