Gene detail information of Glyur000068s00006835.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32460.1 | 3.00E-55 | myb domain protein 101 |
| NR | XP_007149977.1 | 3.63E-147 | hypothetical protein PHAVU_005G115500g [Phaseolus vulgaris] |
| Swissprot | tr|Q0JIC2|GAM1_ORYSJ | 2.00E-62 | Transcription factor GAMYB |
| trEMBL | tr|V7BZ99|V7BZ99_PHAVU | 1.00E-147 | Uncharacterized protein {ECO:0000313|EMBL:ESW21971.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00068 | 160182 | 162185 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000068s00006835.1 | PF13921.1 | Myb_DNA-bind_6 | 35 | 94 | 9.00E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.081 |
| SRR1783600 | control | 0.104 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.393 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.103 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.517 |
| SRR2967015 | Control (Tissue:root) | 0.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.078 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.050 |
| SRR8749028 | MeJA induced 9h | 0.206 |
| SRR8749029 | MeJA induced 9h | 0.251 |
| SRR8749030 | Uninduced | 0.366 |
| SRR8749031 | Uninduced | 0.459 |
| SRR8749032 | Uninduced | 0.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.127 |
| SRR8400027 | Control-Root | 0.195 |