Gene detail information of Glyur000068s00006850.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62300.1 | 2.00E-95 | WRKY family transcription factor |
| NR | XP_007132527.1 | 0 | hypothetical protein PHAVU_011G101900g [Phaseolus vulgaris] |
| Swissprot | tr|Q9C519|WRKY6_ARATH | 2.00E-130 | WRKY transcription factor 6 |
| trEMBL | tr|V7AK80|V7AK80_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW04521.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00068 | 233283 | 235970 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000068s00006850.1 | PF03106.10 | WRKY | 365 | 423 | 6.30E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.518 |
| SRR1783600 | control | 1.490 |
| SRR1783602 | moderate drought stress | 1.169 |
| SRR1811619 | moderate drought stress | 1.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.059 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.057 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.058 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.058 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.573 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.782 |
| SRR2868004 | Drought Stress(Tissue:root) | 21.407 |
| SRR2967015 | Control (Tissue:root) | 16.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.512 |
| SRR9715740 | Leave | 1.627 |
| SRR9715741 | Leave | 2.770 |
| SRR9715739 | Root | 1.076 |
| SRR9715742 | Root | 3.530 |
| SRR9715743 | Root | 2.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 65.820 |
| SRR8749028 | MeJA induced 9h | 51.486 |
| SRR8749029 | MeJA induced 9h | 52.121 |
| SRR8749030 | Uninduced | 34.791 |
| SRR8749031 | Uninduced | 14.886 |
| SRR8749032 | Uninduced | 6.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.161 |
| SRR8400027 | Control-Root | 6.230 |