Gene detail information of Glyur000068s00006851.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G32520.12.00E-112alpha/beta-Hydrolases superfamily protein
NRXP_004506256.10PREDICTED: protein usf-like [Cicer arietinum]
COGYP_001156054.16.00E-45carboxymethylenebutenolidase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1]
trEMBLtr|A0A072UJ41|A0A072UJ41_MEDTR1.00E-180Dienelactone hydrolase family protein {ECO:0000313|EMBL:KEH29707.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00068242601246046-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01061E3.1.1.45 EC:3.1.1.45 Fluorobenzoate degradation map00364
Chlorocyclohexane and chlorobenzene degradationmap00361
Toluene degradationmap00623


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000068s00006851.1PF01738.13DLH532734.00E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.905
SRR1783600control24.896
SRR1783602moderate drought stress24.405
SRR1811619moderate drought stress24.278

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain57.226
DRR006520Root Summer glycyrrhizin high producing strain56.326
DRR006521Root Winter glycyrrhizin high producing strain14.945
DRR006522Root Winter glycyrrhizin high producing strain14.485
DRR006523Root Summer glycyrrhizin low producing strain38.560
DRR006524Root Summer glycyrrhizin low producing strain38.322
DRR006525Leaf Summer glycyrrhizin high producing strain35.876
DRR006526Leaf Summer glycyrrhizin high producing strain35.905

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)141.401
SRR2868004Drought Stress(Tissue:root)106.009
SRR2967015Control (Tissue:root)96.397

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave55.434
SRR9715740Leave54.125
SRR9715741Leave57.139
SRR9715739Root70.700
SRR9715742Root52.869
SRR9715743Root58.564

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h97.888
SRR8749028MeJA induced 9h49.949
SRR8749029MeJA induced 9h87.693
SRR8749030Uninduced18.439
SRR8749031Uninduced9.606
SRR8749032Uninduced26.347

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root86.075
SRR8400027Control-Root88.025

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved