Gene detail information of Glyur000068s00006864.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08465.1 | 3.00E-36 | Plant-specific transcription factor YABBY family protein |
| NR | KHN41251.1 | 3.16E-74 | Putative axial regulator YABBY 2 [Glycine soja] |
| Swissprot | tr|Q9XFB0|YAB2_ARATH | 3.00E-48 | Putative axial regulator YABBY 2 |
| trEMBL | tr|I1KFH5|I1KFH5_SOYBN | 1.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G46560.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00068 | 322092 | 327825 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2C2-YABBY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000068s00006864.1 | PF04690.8 | YABBY | 3 | 168 | 6.30E-45 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.142 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.131 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.823 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.001 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 35.236 |
| SRR9715740 | Leave | 36.628 |
| SRR9715741 | Leave | 33.328 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.315 |
| SRR9715743 | Root | 0.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.021 |
| SRR8400027 | Control-Root | 0.536 |