Gene detail information of Glyur000069s00004054.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05140.1 | 4.00E-113 | ROP binding protein kinases 2 |
| NR | XP_004495756.1 | 1.17E-172 | PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Cicer arietinum] |
| COG | NP_623114.1 | 6.00E-09 | Serine/threonine protein kinase [Thermoanaerobacter tengcongensis MB4] |
| Swissprot | tr|Q8RXC8|RBK2_ARATH | 2.00E-137 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 |
| trEMBL | tr|K7N570|K7N570_SOYBN | 3.00E-167 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G37470.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00069 | 168678 | 171418 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.10.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000069s00004054.1 | PF07714.12 | Pkinase_Tyr | 126 | 209 | 9.40E-11 |
| Glyur000069s00004054.1 | PF00069.20 | Pkinase | 211 | 284 | 3.10E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.324 |
| SRR1783600 | control | 0.363 |
| SRR1783602 | moderate drought stress | 0.459 |
| SRR1811619 | moderate drought stress | 0.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.327 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.504 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.927 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.733 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.094 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.220 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.233 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.158 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.066 |
| SRR2967015 | Control (Tissue:root) | 0.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.361 |
| SRR9715740 | Leave | 0.284 |
| SRR9715741 | Leave | 0.788 |
| SRR9715739 | Root | 2.453 |
| SRR9715742 | Root | 1.345 |
| SRR9715743 | Root | 1.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.703 |
| SRR8749028 | MeJA induced 9h | 0.831 |
| SRR8749029 | MeJA induced 9h | 2.084 |
| SRR8749030 | Uninduced | 4.670 |
| SRR8749031 | Uninduced | 8.966 |
| SRR8749032 | Uninduced | 3.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.481 |
| SRR8400027 | Control-Root | 0.432 |