Gene detail information of Glyur000069s00004071.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72210.1 | 5.00E-63 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_003554664.1 | 2.89E-154 | PREDICTED: transcription factor bHLH96-like [Glycine max] |
| Swissprot | tr|Q9C7T4|BH096_ARATH | 1.00E-80 | Transcription factor bHLH96 |
| trEMBL | tr|I1NC11|I1NC11_SOYBN | 1.00E-154 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G42520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00069 | 271927 | 274179 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000069s00004071.1 | PF00010.21 | HLH | 149 | 200 | 2.10E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 52.601 |
| SRR1783600 | control | 52.401 |
| SRR1783602 | moderate drought stress | 64.742 |
| SRR1811619 | moderate drought stress | 64.425 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 88.087 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 87.041 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.763 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.792 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.097 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.349 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.826 |
| SRR2967015 | Control (Tissue:root) | 6.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.176 |
| SRR9715740 | Leave | 0.033 |
| SRR9715741 | Leave | 0.034 |
| SRR9715739 | Root | 23.164 |
| SRR9715742 | Root | 12.607 |
| SRR9715743 | Root | 16.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 33.263 |
| SRR8400027 | Control-Root | 33.090 |