Gene detail information of Glyur000069s00004078.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08970.43.00E-62nuclear factor Y, subunit C9
NRXP_004494629.11.82E-170PREDICTED: nuclear transcription factor Y subunit C-9-like [Cicer arietinum]
Swissprottr|Q8L4B2|NFYC9_ARATH7.00E-86Nuclear transcription factor Y subunit C-9
trEMBLtr|I3TAX9|I3TAX9_MEDTR2.00E-168Nuclear transcription factor Y subunit C2 {ECO:0000313|EMBL:AFK49671.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00069336537339375+


Gene family

Gene familysubfamily
Transcription Factors FamilyNF-YC
EAR motif-containing ProteinsNF-YC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005622  intracellular

GO:0016602  CCAAT-binding factor complex


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

GO:0046982  protein heterodimerization activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000069s00004078.1PF00808.18CBFD_NFYB_HMF1011646.40E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control61.650
SRR1783600control61.163
SRR1783602moderate drought stress58.720
SRR1811619moderate drought stress57.867

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain98.743
DRR006520Root Summer glycyrrhizin high producing strain99.825
DRR006521Root Winter glycyrrhizin high producing strain119.803
DRR006522Root Winter glycyrrhizin high producing strain117.232
DRR006523Root Summer glycyrrhizin low producing strain88.741
DRR006524Root Summer glycyrrhizin low producing strain89.662
DRR006525Leaf Summer glycyrrhizin high producing strain35.467
DRR006526Leaf Summer glycyrrhizin high producing strain36.173

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)84.132
SRR2868004Drought Stress(Tissue:root)112.614
SRR2967015Control (Tissue:root)108.055

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave35.868
SRR9715740Leave37.017
SRR9715741Leave48.696
SRR9715739Root60.590
SRR9715742Root90.093
SRR9715743Root84.400

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h261.907
SRR8749028MeJA induced 9h244.093
SRR8749029MeJA induced 9h218.115
SRR8749030Uninduced107.592
SRR8749031Uninduced77.071
SRR8749032Uninduced63.405

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root96.606
SRR8400027Control-Root97.095

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved