Gene detail information of Glyur000069s00004081.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G27450.32.00E-115mevalonate kinase
NRAID51439.10mevalonate kinase [Astragalus membranaceus]
COGYP_003649545.15.00E-35mevalonate kinase [Thermosphaera aggregans DSM 11486]
Swissprottr|P46086|KIME_ARATH7.00E-174Mevalonate kinase
trEMBLtr|A0A075EAM2|A0A075EAM2_ASTME0Mevalonate kinase {ECO:0000313|EMBL:AID51439.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00069345177351775+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00869E2.7.1.36, MVK, mvaK1 EC:2.7.1.36 Terpenoid backbone biosynthesis map00900
Peroxisomemap04146


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0008299  isoprenoid biosynthetic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0004496  mevalonate kinase activity

GO:0005524  ATP binding

GO:0016301  kinase activity

GO:0016773  phosphotransferase activity, alcohol group as acceptor

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000069s00004081.1PF00288.21GHMP_kinases_N1151951.50E-23
Glyur000069s00004081.1PF08544.8GHMP_kinases_C2773333.30E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.535
SRR1783600control7.504
SRR1783602moderate drought stress6.962
SRR1811619moderate drought stress7.105

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.444
DRR006520Root Summer glycyrrhizin high producing strain7.242
DRR006521Root Winter glycyrrhizin high producing strain1.362
DRR006522Root Winter glycyrrhizin high producing strain1.388
DRR006523Root Summer glycyrrhizin low producing strain3.176
DRR006524Root Summer glycyrrhizin low producing strain3.038
DRR006525Leaf Summer glycyrrhizin high producing strain3.159
DRR006526Leaf Summer glycyrrhizin high producing strain3.095

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.066
SRR2868004Drought Stress(Tissue:root)20.875
SRR2967015Control (Tissue:root)18.277

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.500
SRR9715740Leave5.313
SRR9715741Leave7.076
SRR9715739Root7.445
SRR9715742Root9.770
SRR9715743Root8.668

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.132
SRR8749028MeJA induced 9h4.146
SRR8749029MeJA induced 9h3.038
SRR8749030Uninduced2.885
SRR8749031Uninduced1.238
SRR8749032Uninduced1.293

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.879
SRR8400027Control-Root16.103

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved