Gene detail information of Glyur000070s00008025.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G43850.13.00E-153Integrin-linked protein kinase family
NRXP_006580219.10PREDICTED: serine/threonine-protein kinase CTR1-like isoform X2 [Glycine max]
COGYP_003266793.16.00E-20serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
Swissprottr|Q05609|CTR1_ARATH5.00E-35Serine/threonine-protein kinase CTR1
trEMBLtr|K7KQN9|K7KQN9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G30120.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0007051314494-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000070s00008025.1PF12796.2Ank_2781354.20E-11
Glyur000070s00008025.1PF00069.20Pkinase3275921.30E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.634
SRR1783600control19.006
SRR1783602moderate drought stress18.500
SRR1811619moderate drought stress18.230

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.070
DRR006520Root Summer glycyrrhizin high producing strain18.526
DRR006521Root Winter glycyrrhizin high producing strain10.475
DRR006522Root Winter glycyrrhizin high producing strain10.488
DRR006523Root Summer glycyrrhizin low producing strain26.876
DRR006524Root Summer glycyrrhizin low producing strain28.053
DRR006525Leaf Summer glycyrrhizin high producing strain21.884
DRR006526Leaf Summer glycyrrhizin high producing strain21.848

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.575
SRR2868004Drought Stress(Tissue:root)37.804
SRR2967015Control (Tissue:root)38.545

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave43.109
SRR9715740Leave42.400
SRR9715741Leave44.830
SRR9715739Root13.449
SRR9715742Root25.092
SRR9715743Root22.468

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h51.196
SRR8749028MeJA induced 9h39.164
SRR8749029MeJA induced 9h50.398
SRR8749030Uninduced41.789
SRR8749031Uninduced24.567
SRR8749032Uninduced28.749

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.732
SRR8400027Control-Root28.670

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved