Gene detail information of Glyur000070s00008026.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G31810.10ACT domain-containing small subunit of acetolactate synthase protein
NRXP_004490063.10PREDICTED: acetolactate synthase small subunit 2, chloroplastic-like isoform X2 [Cicer arietinum]
COGYP_007173361.14.00E-58acetolactate synthase small subunit [Dactylococcopsis salina PCC 8305]
Swissprottr|Q93YZ7|ILVH2_ARATH0Acetolactate synthase small subunit 2, chloroplastic (Precursor)
trEMBLtr|K7KQP0|K7KQP0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G30130.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000701407320525+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01653E2.2.1.6S, ilvH, ilvN EC:2.2.1.6 2-Oxocarboxylic acid metabolism map01210
Biosynthesis of amino acidsmap01230
Butanoate metabolismmap00650
C5-Branched dibasic acid metabolismmap00660
Valine, leucine and isoleucine biosynthesismap00290
Pantothenate and CoA biosynthesismap00770


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0009082  branched-chain amino acid biosynthetic process


molecular_function

GO:0003984  acetolactate synthase activity

GO:0016597  amino acid binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000070s00008026.2PF13710.1ACT_5901492.00E-13
Glyur000070s00008026.2PF10369.4ALS_ss_C1592333.50E-30
Glyur000070s00008026.2PF13710.1ACT_53223842.00E-13
Glyur000070s00008026.2PF10369.4ALS_ss_C3944682.30E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.882
SRR1783600control25.624
SRR1783602moderate drought stress29.895
SRR1811619moderate drought stress30.053

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.062
DRR006520Root Summer glycyrrhizin high producing strain23.638
DRR006521Root Winter glycyrrhizin high producing strain18.278
DRR006522Root Winter glycyrrhizin high producing strain17.764
DRR006523Root Summer glycyrrhizin low producing strain28.281
DRR006524Root Summer glycyrrhizin low producing strain28.246
DRR006525Leaf Summer glycyrrhizin high producing strain22.674
DRR006526Leaf Summer glycyrrhizin high producing strain21.728

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.707
SRR2868004Drought Stress(Tissue:root)26.240
SRR2967015Control (Tissue:root)27.020

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.242
SRR9715740Leave28.929
SRR9715741Leave31.672
SRR9715739Root21.460
SRR9715742Root38.876
SRR9715743Root37.080

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h73.966
SRR8749028MeJA induced 9h45.576
SRR8749029MeJA induced 9h44.842
SRR8749030Uninduced25.801
SRR8749031Uninduced12.964
SRR8749032Uninduced18.339

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.006
SRR8400027Control-Root38.051

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved