Gene detail information of Glyur000070s00008039.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10940.1 | 1.00E-71 | Protein kinase superfamily protein |
| NR | XP_004504186.1 | 1.32E-89 | PREDICTED: serine/threonine-protein kinase SAPK7-like [Cicer arietinum] |
| COG | NP_374336.1 | 9.00E-18 | protein kinase [Staphylococcus aureus subsp. aureus N315] |
| Swissprot | tr|P43291|SRK2A_ARATH | 7.00E-88 | Serine/threonine-protein kinase SRK2A |
| trEMBL | tr|A0A078I5T5|A0A078I5T5_BRANA | 1.00E-87 | BnaA01g23120D protein {ECO:0000313|EMBL:CDY46190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00070 | 70807 | 72750 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.2.4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K14498 | SNRK2 | EC:2.7.11.1 | MAPK signaling pathway - plant | map04016 |
| Plant hormone signal transduction | map04075 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000070s00008039.1 | PF00069.20 | Pkinase | 4 | 136 | 4.00E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.043 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.118 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.780 |
| SRR2967015 | Control (Tissue:root) | 0.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.252 |
| SRR9715740 | Leave | 0.350 |
| SRR9715741 | Leave | 0.444 |
| SRR9715739 | Root | 0.235 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.078 |
| SRR8749029 | MeJA induced 9h | 0.197 |
| SRR8749030 | Uninduced | 0.118 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.138 |
| SRR8400027 | Control-Root | 0.180 |