Gene detail information of Glyur000070s00008042.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G60990.36.00E-128Glycine cleavage T-protein family
NRXP_003629967.10Aminomethyltransferase [Medicago truncatula]
COGYP_007117980.19.00E-68folate-binding protein YgfZ [Oscillatoria nigro-viridis PCC 7112]
Swissprottr|O04086|Y1105_ARATH1.00E-130Probable receptor-like protein kinase At1g11050 (Precursor)
trEMBLtr|G7L8V3|G7L8V3_MEDTR0Glycine cleavage T-protein aminomethyltransferase {ECO:0000313|EMBL:AET04443.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000707875291501-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000070s00008042.1PF01571.16GCV_T1021553.90E-11
Glyur000070s00008042.1PF01571.16GCV_T1592543.00E-12
Glyur000070s00008042.1PF08669.6GCV_T_C2853721.40E-08
Glyur000070s00008042.1PF00069.20Pkinase3905987.60E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.572
SRR1783600control5.549
SRR1783602moderate drought stress5.393
SRR1811619moderate drought stress5.169

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.900
DRR006520Root Summer glycyrrhizin high producing strain6.189
DRR006521Root Winter glycyrrhizin high producing strain4.825
DRR006522Root Winter glycyrrhizin high producing strain4.580
DRR006523Root Summer glycyrrhizin low producing strain4.620
DRR006524Root Summer glycyrrhizin low producing strain4.712
DRR006525Leaf Summer glycyrrhizin high producing strain10.839
DRR006526Leaf Summer glycyrrhizin high producing strain10.875

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.929
SRR2868004Drought Stress(Tissue:root)9.706
SRR2967015Control (Tissue:root)10.738

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.644
SRR9715740Leave12.917
SRR9715741Leave12.695
SRR9715739Root4.132
SRR9715742Root12.917
SRR9715743Root11.600

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.646
SRR8749028MeJA induced 9h10.398
SRR8749029MeJA induced 9h11.766
SRR8749030Uninduced8.384
SRR8749031Uninduced9.784
SRR8749032Uninduced14.775

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.916
SRR8400027Control-Root10.753

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved