Gene detail information of Glyur000070s00008086.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24470.1 | 2.00E-78 | beta-ketoacyl reductase 2 |
| NR | XP_003532805.1 | 6.08E-158 | PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470-like [Glycine max] |
| COG | YP_001866357.1 | 1.00E-25 | short-chain dehydrogenase/reductase SDR [Nostoc punctiforme PCC 73102] |
| Swissprot | tr|Q9FYL6|KCR2_ARATH | 4.00E-107 | Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 |
| trEMBL | tr|K7L6D2|K7L6D2_SOYBN | 4.00E-158 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G13750.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00070 | 359390 | 372223 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K10251 | HSD17B12, KAR, IFA38 | EC:1.1.1.62 1.1.1.330 | Fatty acid metabolism | map01212 |
| Fatty acid elongation | map00062 | |||
| Steroid hormone biosynthesis | map00140 | |||
| Biosynthesis of unsaturated fatty acids | map01040 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000070s00008086.1 | PF00106.20 | adh_short | 57 | 217 | 3.00E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.087 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.235 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.002 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.045 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.118 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.016 |
| SRR8400027 | Control-Root | 0.032 |