Gene detail information of Glyur000071s00005220.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G28590.12.00E-103GDSL-like Lipase/Acylhydrolase superfamily protein
NRXP_006415636.10hypothetical protein EUTSA_v10006895mg [Eutrema salsugineum]
COGYP_436892.12.00E-10phospholipase/lecithinase/hemolysin [Hahella chejuensis KCTC 2396]
Swissprottr|Q8RXT9|GDL8_ARATH3.00E-122GDSL esterase/lipase At1g28590 (Precursor)
trEMBLtr|V4KRU4|V4KRU4_EUTSA0Uncharacterized protein {ECO:0000313|EMBL:ESQ33989.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000711404226484-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K21026AAE EC:3.1.1.80 Indole alkaloid biosynthesis map00901


Gene Ontology

molecular_function

GO:0016788  hydrolase activity, acting on ester bonds



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000071s00005220.2PF00657.17Lipase_GDSL413681.50E-18
Glyur000071s00005220.2PF00657.17Lipase_GDSL4227502.60E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.782
SRR1783600control6.866
SRR1783602moderate drought stress7.880
SRR1811619moderate drought stress10.196

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.806
DRR006520Root Summer glycyrrhizin high producing strain5.347
DRR006521Root Winter glycyrrhizin high producing strain0.647
DRR006522Root Winter glycyrrhizin high producing strain0.692
DRR006523Root Summer glycyrrhizin low producing strain1.655
DRR006524Root Summer glycyrrhizin low producing strain1.717
DRR006525Leaf Summer glycyrrhizin high producing strain9.995
DRR006526Leaf Summer glycyrrhizin high producing strain15.300

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.907
SRR2868004Drought Stress(Tissue:root)13.145
SRR2967015Control (Tissue:root)14.334

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.271
SRR9715740Leave10.767
SRR9715741Leave15.026
SRR9715739Root5.414
SRR9715742Root4.950
SRR9715743Root5.145

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.918
SRR8749028MeJA induced 9h24.109
SRR8749029MeJA induced 9h20.121
SRR8749030Uninduced9.993
SRR8749031Uninduced32.363
SRR8749032Uninduced44.959

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.743
SRR8400027Control-Root9.138

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved