Gene detail information of Glyur000071s00005231.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G45910.15.00E-89GDSL-like Lipase/Acylhydrolase superfamily protein
NRKHN31271.10GDSL esterase/lipase [Glycine soja]
COGNP_924836.18.00E-13hypothetical protein gll1890 [Gloeobacter violaceus PCC 7421]
Swissprottr|Q9FJ45|GDL83_ARATH2.00E-107GDSL esterase/lipase At5g45910 (Precursor)
trEMBLtr|A0A072TK31|A0A072TK31_MEDTR0GDSL-like lipase/acylhydrolase {ECO:0000313|EMBL:KEH17248.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000715956362382-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K21026AAE EC:3.1.1.80 Indole alkaloid biosynthesis map00901


Gene Ontology

molecular_function

GO:0016788  hydrolase activity, acting on ester bonds



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000071s00005231.1PF00657.17Lipase_GDSL493684.10E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.186
SRR1783600control1.275
SRR1783602moderate drought stress1.407
SRR1811619moderate drought stress1.243

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.095
DRR006520Root Summer glycyrrhizin high producing strain1.957
DRR006521Root Winter glycyrrhizin high producing strain0.859
DRR006522Root Winter glycyrrhizin high producing strain0.724
DRR006523Root Summer glycyrrhizin low producing strain3.590
DRR006524Root Summer glycyrrhizin low producing strain3.806
DRR006525Leaf Summer glycyrrhizin high producing strain0.705
DRR006526Leaf Summer glycyrrhizin high producing strain0.810

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.142
SRR2868004Drought Stress(Tissue:root)1.192
SRR2967015Control (Tissue:root)0.848

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.216
SRR9715740Leave2.905
SRR9715741Leave1.128
SRR9715739Root0.372
SRR9715742Root0.288
SRR9715743Root0.461

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.277
SRR8749028MeJA induced 9h7.306
SRR8749029MeJA induced 9h10.170
SRR8749030Uninduced6.167
SRR8749031Uninduced1.692
SRR8749032Uninduced1.952

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.099
SRR8400027Control-Root1.777

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved