Gene detail

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Gene detail information of Glyur000071s00005243.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G34060.1	2.00E-122	Peroxidase superfamily protein
NR	KEH30935.1	0	peroxidase family protein [Medicago truncatula]
Swissprot	tr\|O22959\|PER19_ARATH	3.00E-154	Peroxidase 19 (Precursor)
trEMBL	tr\|A0A072UYL4\|A0A072UYL4_MEDTR	0	Peroxidase family protein {ECO:0000313\|EMBL:KEH30935.1}

Sequence

Transcript Sequence

>Glyur000071s00005243.1
CCCTATAATATGTAAATTCCCTTTTCTCTCACTCATTGCTTATACTTATCTCTGCCCCATACAAACGTTCATCCTCGTTCTCACGGTTGTAAACTGCCCCATTAACCAAAATCATGTCTGTACCTTCTTCTGCAGCTTCGTTTCTTTTCACTTCTTTCTTTGTTTTCTTCACTTTGACTGAGACAACTTCATCATGTTTAGCCAAAATAGCAAAAACTACACGCCCCCATAGACAGCTCTCAGTTGAATACTATGCAAAATCTTGCCCTCAGGTAGAGCAGTTAGTTGGCTCTGTCACATCTCAACAATTCAAAGAATCACCTGTTTCTGCCCCTGCCACCATTCGCCTNCTCTTCCATGATTGCTTTGTTGGAGGGTGTGATGCATCAATTTTAATATCAACAAANCCTGGAAGCAAGGAGTTAGCAGAGAAGGATGCAGAGGTTAACAAGGACTTGAGGGTGGAGGGATTTGAGACTATAAGGAAGGCTAAANCATTGGTGGAGAGGAAGTGCCCAGGAGTAGTATCTTGTGCAGACATTCTTGTTATTGCAGCAAGAGATTATGTACACCTGGCAGGAGGGCCCTATTACCAAGTGAAGAAGGGAAGATGGGATGGAAAGATCTCAATGGCATCAAGGGTAGGGCACAATATTCCCCGTGCAAACTCCACCGTTGATCACATGATCAAACTCTTCAATTCCAAAGGCTTAACCATAAAGGACATGGTTGCCCTCTCNGGTGCCCACACCTTTGGGTTTGCTCATTGCAGGCACTTTGTAACCAGGCTATACAATTACCGGGGCACGGGGCAGCCCGACCCGGATATGAAGCCGAGGCTCATCCACGCACTGAGATTGTATTGCCCCCGTTANGGGGGGAATTTGGATATTGTGACCCCATTTGATGTCACAACCCCGTTCTTATTTGACCATGCCTATTACGGGAACTTGGAGAAGAAGTTGGGCTTGCTAGCCTCTGACCAAGCCCTGTTTTTGGACCCACGAACCAAGCCTCTGGTTCAAGCTTTAGCACAGGATAAACATAAATTTTCCCAAGCTTTTGCAGCTGCAATGGATAAAATGAGTTCGATAAAAGTGGTGAGAGGGAAAAAACACGGGGAGAAAAGAAAAGATTGCAGCATNTTTGCGTGAAAAATACAAGTACTTTCTAGTTTCTATACAACTATT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00071	110917	114061	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function GO:0004601 peroxidase activity GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000071s00005243.1	PF00141.18	peroxidase	61	309	2.00E-69

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.853
SRR1783600	control	3.892
SRR1783602	moderate drought stress	5.442
SRR1811619	moderate drought stress	5.430

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.875
DRR006520	Root Summer glycyrrhizin high producing strain	1.065
DRR006521	Root Winter glycyrrhizin high producing strain	0.780
DRR006522	Root Winter glycyrrhizin high producing strain	1.051
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	61.378
DRR006526	Leaf Summer glycyrrhizin high producing strain	61.005

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	2.970
SRR2868004	Drought Stress(Tissue:root)	2.050
SRR2967015	Control (Tissue:root)	2.178

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	7.108
SRR9715740	Leave	8.132
SRR9715741	Leave	6.760
SRR9715739	Root	0.120
SRR9715742	Root	1.057
SRR9715743	Root	0.786

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.845
SRR8749028	MeJA induced 9h	3.450
SRR8749029	MeJA induced 9h	3.568
SRR8749030	Uninduced	4.155
SRR8749031	Uninduced	2.191
SRR8749032	Uninduced	3.119

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	4.722
SRR8400027	Control-Root	4.184