Gene detail information of Glyur000071s00005251.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G47220.11.00E-27ethylene responsive element binding factor 2
NRXP_006597470.11.74E-72PREDICTED: pathogenesis-related genes transcriptional activator PTI5 [Glycine max]
Swissprottr|O04681|PTI5_SOLLC6.00E-58Pathogenesis-related genes transcriptional activator PTI5
trEMBLtr|G7IFJ0|G7IFJ0_MEDTR3.00E-70Ethylene response factor {ECO:0000313|EMBL:AES63941.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00071141249141812-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000071s00005251.1PF00847.15AP2631131.10E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.658
SRR1783600control9.586
SRR1783602moderate drought stress7.470
SRR1811619moderate drought stress8.452

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain63.515
DRR006520Root Summer glycyrrhizin high producing strain62.046
DRR006521Root Winter glycyrrhizin high producing strain0.198
DRR006522Root Winter glycyrrhizin high producing strain0.159
DRR006523Root Summer glycyrrhizin low producing strain75.931
DRR006524Root Summer glycyrrhizin low producing strain72.196
DRR006525Leaf Summer glycyrrhizin high producing strain241.067
DRR006526Leaf Summer glycyrrhizin high producing strain242.336

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.123
SRR2868004Drought Stress(Tissue:root)61.108
SRR2967015Control (Tissue:root)86.461

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave297.071
SRR9715740Leave341.066
SRR9715741Leave432.873
SRR9715739Root41.550
SRR9715742Root50.185
SRR9715743Root40.556

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h552.708
SRR8749028MeJA induced 9h420.339
SRR8749029MeJA induced 9h908.947
SRR8749030Uninduced141.573
SRR8749031Uninduced302.967
SRR8749032Uninduced486.381

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.977
SRR8400027Control-Root18.992

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved