Gene detail information of Glyur000071s00005270.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28520.2 | 4.00E-172 | vascular plant one zinc finger protein |
| NR | XP_006594297.1 | 0 | PREDICTED: transcription factor VOZ1-like [Glycine max] |
| Swissprot | tr|Q9SGQ0|VOZ1_ARATH | 0 | Transcription factor VOZ1 |
| trEMBL | tr|I1M050|I1M050_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G24170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 236680 | 240117 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | VOZ |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.403 |
| SRR1783600 | control | 2.319 |
| SRR1783602 | moderate drought stress | 2.880 |
| SRR1811619 | moderate drought stress | 2.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.905 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.892 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.508 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.361 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.244 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.143 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.480 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.150 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.026 |
| SRR2967015 | Control (Tissue:root) | 12.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 14.927 |
| SRR9715740 | Leave | 19.688 |
| SRR9715741 | Leave | 17.964 |
| SRR9715739 | Root | 2.185 |
| SRR9715742 | Root | 7.364 |
| SRR9715743 | Root | 5.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.579 |
| SRR8749028 | MeJA induced 9h | 4.924 |
| SRR8749029 | MeJA induced 9h | 2.232 |
| SRR8749030 | Uninduced | 2.691 |
| SRR8749031 | Uninduced | 0.678 |
| SRR8749032 | Uninduced | 0.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.476 |
| SRR8400027 | Control-Root | 6.253 |