Gene detail information of Glyur000071s00005278.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28470.1 | 9.00E-93 | NAC domain containing protein 10 |
| NR | XP_003529352.1 | 2.12E-153 | PREDICTED: NAC domain-containing protein 8-like [Glycine max] |
| Swissprot | tr|Q6NQK2|NAC8_ARATH | 1.00E-66 | NAC domain-containing protein 8 |
| trEMBL | tr|I1KLQ2|I1KLQ2_SOYBN | 8.00E-154 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G32250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 292211 | 295745 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000071s00005278.1 | PF02365.10 | NAM | 74 | 214 | 4.40E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.415 |
| SRR1783600 | control | 2.425 |
| SRR1783602 | moderate drought stress | 1.641 |
| SRR1811619 | moderate drought stress | 1.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.771 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.851 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.667 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.920 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.769 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.184 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.140 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.145 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.248 |
| SRR2967015 | Control (Tissue:root) | 4.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.669 |
| SRR9715740 | Leave | 2.652 |
| SRR9715741 | Leave | 3.405 |
| SRR9715739 | Root | 0.135 |
| SRR9715742 | Root | 1.544 |
| SRR9715743 | Root | 1.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.095 |
| SRR8749028 | MeJA induced 9h | 62.847 |
| SRR8749029 | MeJA induced 9h | 39.119 |
| SRR8749030 | Uninduced | 22.571 |
| SRR8749031 | Uninduced | 59.316 |
| SRR8749032 | Uninduced | 27.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.292 |
| SRR8400027 | Control-Root | 4.037 |