Gene detail information of Glyur000071s00005280.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G46080.11.00E-73Protein kinase superfamily protein
NRXP_007148114.10hypothetical protein PHAVU_006G181600g [Phaseolus vulgaris]
COGYP_004092358.18.00E-14serine/threonine protein kinase with PASTA sensor(s) [Ethanoligenens harbinense YUAN-3]
Swissprottr|Q9LX29|ACR4L_ARATH7.00E-49Serine/threonine-protein kinase-like protein ACR4 (Precursor)
trEMBLtr|V7BSV2|V7BSV2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW20108.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00071300282301286-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000071s00005280.1PF00069.20Pkinase652608.20E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.645
SRR1783600control0.706
SRR1783602moderate drought stress0.884
SRR1811619moderate drought stress0.872

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.133
DRR006520Root Summer glycyrrhizin high producing strain2.266
DRR006521Root Winter glycyrrhizin high producing strain0.221
DRR006522Root Winter glycyrrhizin high producing strain0.107
DRR006523Root Summer glycyrrhizin low producing strain2.089
DRR006524Root Summer glycyrrhizin low producing strain2.278
DRR006525Leaf Summer glycyrrhizin high producing strain2.076
DRR006526Leaf Summer glycyrrhizin high producing strain2.026

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.283
SRR2868004Drought Stress(Tissue:root)9.389
SRR2967015Control (Tissue:root)6.581

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.839
SRR9715740Leave2.066
SRR9715741Leave2.486
SRR9715739Root2.502
SRR9715742Root1.786
SRR9715743Root2.293

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.377
SRR8749028MeJA induced 9h12.200
SRR8749029MeJA induced 9h3.479
SRR8749030Uninduced9.973
SRR8749031Uninduced2.242
SRR8749032Uninduced3.896

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.265
SRR8400027Control-Root6.270

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved