Gene detail information of Glyur000071s00005283.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G28440.10HAESA-like 1
NRXP_004485839.10PREDICTED: receptor-like protein kinase HSL1-like isoform X1 [Cicer arietinum]
COGYP_004775215.16.00E-55RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9SGP2|HSL1_ARATH0Receptor-like protein kinase HSL1 (Precursor)
trEMBLtr|I1M066|I1M066_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G24340.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00071310472314495-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000071s00005283.1PF08263.7LRRNT_226652.10E-11
Glyur000071s00005283.1PF13516.1LRR_6941080.25
Glyur000071s00005283.1PF13516.1LRR_61181340.27
Glyur000071s00005283.1PF00560.28LRR_11441640.71
Glyur000071s00005283.1PF00560.28LRR_11932151.1
Glyur000071s00005283.1PF12799.2LRR_42162566.20E-09
Glyur000071s00005283.1PF00560.28LRR_15535741.3
Glyur000071s00005283.1PF00560.28LRR_15755930.52
Glyur000071s00005283.1PF00069.20Pkinase6909121.20E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.014
SRR1783600control20.803
SRR1783602moderate drought stress15.949
SRR1811619moderate drought stress15.393

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.691
DRR006520Root Summer glycyrrhizin high producing strain20.063
DRR006521Root Winter glycyrrhizin high producing strain8.709
DRR006522Root Winter glycyrrhizin high producing strain8.306
DRR006523Root Summer glycyrrhizin low producing strain13.949
DRR006524Root Summer glycyrrhizin low producing strain14.085
DRR006525Leaf Summer glycyrrhizin high producing strain3.199
DRR006526Leaf Summer glycyrrhizin high producing strain3.242

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)42.615
SRR2868004Drought Stress(Tissue:root)44.013
SRR2967015Control (Tissue:root)44.124

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.623
SRR9715740Leave2.415
SRR9715741Leave1.515
SRR9715739Root22.439
SRR9715742Root20.092
SRR9715743Root20.648

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.531
SRR8749028MeJA induced 9h1.872
SRR8749029MeJA induced 9h1.336
SRR8749030Uninduced0.035
SRR8749031Uninduced0.085
SRR8749032Uninduced0.119

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.381
SRR8400027Control-Root49.786

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved