Gene detail information of Glyur000071s00005288.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G28420.10homeobox-1
NRXP_003541723.10PREDICTED: uncharacterized protein LOC100777465 isoform X1 [Glycine max]
trEMBLtr|I1M1Z5|I1M1Z5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G30860.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00071337334348161+


Gene family

Gene familysubfamily
Transcription Factors FamilyHB
EAR motif-containing ProteinsHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000071s00005288.1PF00046.24Homeobox491046.00E-16
Glyur000071s00005288.1PF02791.12DDT5606187.50E-25
Glyur000071s00005288.1PF05066.8HARE-HTH7418091.30E-12
Glyur000071s00005288.1PF15612.1WHIM19539989.40E-05
Glyur000071s00005288.1PF15613.1WHIM2113211693.80E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.307
SRR1783600control23.333
SRR1783602moderate drought stress30.133
SRR1811619moderate drought stress30.001

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.819
DRR006520Root Summer glycyrrhizin high producing strain20.665
DRR006521Root Winter glycyrrhizin high producing strain16.304
DRR006522Root Winter glycyrrhizin high producing strain15.859
DRR006523Root Summer glycyrrhizin low producing strain16.349
DRR006524Root Summer glycyrrhizin low producing strain16.479
DRR006525Leaf Summer glycyrrhizin high producing strain12.090
DRR006526Leaf Summer glycyrrhizin high producing strain12.208

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)42.689
SRR2868004Drought Stress(Tissue:root)51.971
SRR2967015Control (Tissue:root)57.921

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.218
SRR9715740Leave23.624
SRR9715741Leave30.770
SRR9715739Root2.423
SRR9715742Root29.286
SRR9715743Root24.463

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.734
SRR8749028MeJA induced 9h49.108
SRR8749029MeJA induced 9h14.627
SRR8749030Uninduced103.686
SRR8749031Uninduced68.136
SRR8749032Uninduced40.273

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root49.762
SRR8400027Control-Root44.127

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved