Gene detail information of Glyur000071s00005294.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G46970.10alpha-glucan phosphorylase 2
NRXP_004485832.10PREDICTED: glycogen phosphorylase 1-like [Cicer arietinum]
COGYP_001996219.10glycogen/starch/alpha-glucan phosphorylase [Chloroherpeton thalassium ATCC 35110]
Swissprottr|P32811|PHSH_SOLTU0Alpha-glucan phosphorylase, H isozyme
trEMBLtr|V7BU77|V7BU77_PHAVU0Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00071358275368761+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT35


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00688PYG, glgP EC:2.4.1.1 Starch and sucrose metabolism map00500
Biofilm formation - Escherichia colimap02026
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0008152  metabolic process


molecular_function

GO:0004645  phosphorylase activity

GO:0008184  glycogen phosphorylase activity

GO:0016597  amino acid binding

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000071s00005294.2PF00343.15Phosphorylase2679596.50E-278


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.900
SRR1783600control9.953
SRR1783602moderate drought stress9.198
SRR1811619moderate drought stress9.204

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.271
DRR006520Root Summer glycyrrhizin high producing strain7.031
DRR006521Root Winter glycyrrhizin high producing strain5.318
DRR006522Root Winter glycyrrhizin high producing strain5.291
DRR006523Root Summer glycyrrhizin low producing strain4.492
DRR006524Root Summer glycyrrhizin low producing strain4.649
DRR006525Leaf Summer glycyrrhizin high producing strain8.386
DRR006526Leaf Summer glycyrrhizin high producing strain8.304

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.781
SRR2868004Drought Stress(Tissue:root)18.563
SRR2967015Control (Tissue:root)17.185

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.521
SRR9715740Leave17.895
SRR9715741Leave16.975
SRR9715739Root3.217
SRR9715742Root10.789
SRR9715743Root10.098

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.304
SRR8749028MeJA induced 9h19.994
SRR8749029MeJA induced 9h10.387
SRR8749030Uninduced6.373
SRR8749031Uninduced3.919
SRR8749032Uninduced3.983

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.860
SRR8400027Control-Root31.580

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved