Gene detail information of Glyur000071s00005301.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004485813.1 | 3.73E-37 | PREDICTED: ethylene-responsive transcription factor 4-like [Cicer arietinum] |
| trEMBL | tr|I3S6J3|I3S6J3_MEDTR | 9.00E-37 | Uncharacterized protein {ECO:0000313|EMBL:AFK35885.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00071 | 402732 | 403525 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 50.989 |
| SRR1783600 | control | 48.044 |
| SRR1783602 | moderate drought stress | 45.701 |
| SRR1811619 | moderate drought stress | 38.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 217.807 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 212.316 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 155.683 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 161.848 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 288.389 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 278.451 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 49.649 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 48.807 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 47.895 |
| SRR2868004 | Drought Stress(Tissue:root) | 118.311 |
| SRR2967015 | Control (Tissue:root) | 385.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 855.825 |
| SRR9715740 | Leave | 409.356 |
| SRR9715741 | Leave | 947.026 |
| SRR9715739 | Root | 1183.696 |
| SRR9715742 | Root | 1150.099 |
| SRR9715743 | Root | 1067.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 321.412 |
| SRR8749028 | MeJA induced 9h | 413.896 |
| SRR8749029 | MeJA induced 9h | 352.963 |
| SRR8749030 | Uninduced | 204.527 |
| SRR8749031 | Uninduced | 155.265 |
| SRR8749032 | Uninduced | 382.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 122.548 |
| SRR8400027 | Control-Root | 162.071 |