Gene detail information of Glyur000072s00008098.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46770.1 | 4.00E-26 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
| NR | KEH18580.1 | 1.74E-92 | NAC transcription factor-like protein [Medicago truncatula] |
| Swissprot | tr|Q9LPI7|NAC12_ARATH | 1.00E-29 | NAC domain-containing protein 12 |
| trEMBL | tr|A0A072TYE8|A0A072TYE8_MEDTR | 7.00E-93 | NAC transcription factor-like protein {ECO:0000313|EMBL:KEH18580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00072 | 4750 | 6674 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000072s00008098.1 | PF02365.10 | NAM | 15 | 60 | 3.60E-13 |
| Glyur000072s00008098.1 | PF02365.10 | NAM | 61 | 99 | 1.90E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.654 |
| SRR1783600 | control | 2.599 |
| SRR1783602 | moderate drought stress | 3.444 |
| SRR1811619 | moderate drought stress | 3.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.311 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.855 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.631 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.305 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.095 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.553 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.008 |
| SRR2967015 | Control (Tissue:root) | 4.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.135 |
| SRR9715740 | Leave | 4.216 |
| SRR9715741 | Leave | 1.419 |
| SRR9715739 | Root | 1.778 |
| SRR9715742 | Root | 4.955 |
| SRR9715743 | Root | 3.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.085 |
| SRR8400027 | Control-Root | 5.115 |