Gene detail information of Glyur000072s00008108.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01090.10pyruvate dehydrogenase E1 alpha
NRKHN15879.10Pyruvate dehydrogenase E1 component subunit alpha [Glycine soja]
COGYP_005071008.18.00E-174pyruvate dehydrogenase E1 alpha subunit [Arthrospira platensis NIES-39]
Swissprottr|O24457|ODPA3_ARATH0Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic (Precursor)
trEMBLtr|I1MKC6|I1MKC6_SOYBN0Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000726567169344+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00161PDHA, pdhA EC:1.2.4.1 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620
HIF-1 signaling pathwaymap04066
Glucagon signaling pathwaymap04922
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006096  glycolytic process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0043231  intracellular membrane-bounded organelle


molecular_function

GO:0004739  pyruvate dehydrogenase (acetyl-transferring) activity

GO:0016624  oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000072s00008108.1PF00676.15E1_dh953972.00E-96


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.418
SRR1783600control16.471
SRR1783602moderate drought stress11.786
SRR1811619moderate drought stress11.287

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.772
DRR006520Root Summer glycyrrhizin high producing strain14.666
DRR006521Root Winter glycyrrhizin high producing strain4.471
DRR006522Root Winter glycyrrhizin high producing strain4.330
DRR006523Root Summer glycyrrhizin low producing strain12.128
DRR006524Root Summer glycyrrhizin low producing strain12.011
DRR006525Leaf Summer glycyrrhizin high producing strain37.447
DRR006526Leaf Summer glycyrrhizin high producing strain36.802

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)59.744
SRR2868004Drought Stress(Tissue:root)42.423
SRR2967015Control (Tissue:root)41.305

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave63.405
SRR9715740Leave58.142
SRR9715741Leave53.619
SRR9715739Root21.254
SRR9715742Root19.724
SRR9715743Root22.547

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.936
SRR8749028MeJA induced 9h10.701
SRR8749029MeJA induced 9h8.521
SRR8749030Uninduced4.238
SRR8749031Uninduced2.289
SRR8749032Uninduced3.298

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root51.585
SRR8400027Control-Root56.165

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved