Gene detail information of Glyur000072s00008119.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54160.1 | 6.00E-103 | O-methyltransferase 1 |
| NR | KHN06374.1 | 0 | Anthranilate N-methyltransferase [Glycine soja] |
| COG | YP_007126279.1 | 8.00E-33 | Quercetin 3-O-methyltransferase [Gloeocapsa sp. PCC 7428] |
| Swissprot | tr|A9X7L0|ANMT_RUTGR | 2.00E-127 | Anthranilate N-methyltransferase |
| trEMBL | tr|F6H775|F6H775_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB48098.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00072 | 122563 | 136653 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13066 | E2.1.1.68, COMT | EC:2.1.1.68 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000072s00008119.1 | PF08100.6 | Dimerisation | 45 | 96 | 5.10E-16 |
| Glyur000072s00008119.1 | PF00891.13 | Methyltransf_2 | 117 | 346 | 3.00E-84 |
| Glyur000072s00008119.1 | PF08100.6 | Dimerisation | 388 | 438 | 1.80E-13 |
| Glyur000072s00008119.1 | PF00891.13 | Methyltransf_2 | 477 | 624 | 3.30E-59 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.655 |
| SRR1783600 | control | 1.590 |
| SRR1783602 | moderate drought stress | 0.675 |
| SRR1811619 | moderate drought stress | 0.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.058 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.058 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.539 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 337.558 |
| SRR2868004 | Drought Stress(Tissue:root) | 281.702 |
| SRR2967015 | Control (Tissue:root) | 205.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.123 |
| SRR9715740 | Leave | 0.111 |
| SRR9715741 | Leave | 0.036 |
| SRR9715739 | Root | 0.268 |
| SRR9715742 | Root | 0.317 |
| SRR9715743 | Root | 0.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.978 |
| SRR8749028 | MeJA induced 9h | 0.292 |
| SRR8749029 | MeJA induced 9h | 0.681 |
| SRR8749030 | Uninduced | 0.021 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 22.415 |
| SRR8400027 | Control-Root | 21.643 |