Gene detail information of Glyur000072s00008125.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G61960.14.00E-158Protein kinase superfamily protein
NRKEH18557.10Serine/Threonine kinase family protein [Medicago truncatula]
COGYP_360177.14.00E-38serine/threonine protein kinase [Carboxydothermus hydrogenoformans Z-2901]
Swissprottr|O22932|CIPKB_ARATH2.00E-48CBL-interacting serine/threonine-protein kinase 11
trEMBLtr|A0A072TMB4|A0A072TMB4_MEDTR0Serine/Threonine kinase family protein {ECO:0000313|EMBL:KEH18557.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00072163893169119-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08269ULK1_2_3, ATG1 EC:2.7.11.1 mTOR signaling pathway map04150
Autophagy - animalmap04140
Autophagy - yeastmap04138
Mitophagy - yeastmap04139
Longevity regulating pathway - mammalmap04211
Longevity regulating pathway - wormmap04212


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000072s00008125.1PF00069.20Pkinase703266.80E-72


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.806
SRR1783600control2.867
SRR1783602moderate drought stress3.924
SRR1811619moderate drought stress3.910

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.318
DRR006520Root Summer glycyrrhizin high producing strain6.349
DRR006521Root Winter glycyrrhizin high producing strain3.985
DRR006522Root Winter glycyrrhizin high producing strain3.705
DRR006523Root Summer glycyrrhizin low producing strain7.691
DRR006524Root Summer glycyrrhizin low producing strain7.647
DRR006525Leaf Summer glycyrrhizin high producing strain4.786
DRR006526Leaf Summer glycyrrhizin high producing strain4.839

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.514
SRR2868004Drought Stress(Tissue:root)16.401
SRR2967015Control (Tissue:root)20.800

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.595
SRR9715740Leave10.914
SRR9715741Leave10.184
SRR9715739Root5.682
SRR9715742Root5.859
SRR9715743Root5.018

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.297
SRR8749028MeJA induced 9h19.043
SRR8749029MeJA induced 9h10.920
SRR8749030Uninduced13.118
SRR8749031Uninduced14.102
SRR8749032Uninduced13.587

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.941
SRR8400027Control-Root14.513

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved