Gene detail information of Glyur000072s00008128.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01050.11.00E-112pyrophosphorylase 1
NRXP_007135336.11.24E-146hypothetical protein PHAVU_010G120800g [Phaseolus vulgaris]
COGYP_679690.19.00E-68inorganic pyrophosphatase [Cytophaga hutchinsonii ATCC 33406]
Swissprottr|Q43187|IPYR_SOLTU2.00E-134Soluble inorganic pyrophosphatase
trEMBLtr|V7APT6|V7APT6_PHAVU5.00E-147Uncharacterized protein {ECO:0000313|EMBL:ESW07330.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00072181488184618+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01507ppa EC:3.6.1.1 Oxidative phosphorylation map00190


Gene Ontology

biological_process

GO:0006796  phosphate-containing compound metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0000287  magnesium ion binding

GO:0004427  inorganic diphosphatase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000072s00008128.1PF00719.14Pyrophosphatase482011.00E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.799
SRR1783600control11.893
SRR1783602moderate drought stress7.850
SRR1811619moderate drought stress7.835

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.060
DRR006520Root Summer glycyrrhizin high producing strain6.219
DRR006521Root Winter glycyrrhizin high producing strain2.474
DRR006522Root Winter glycyrrhizin high producing strain2.183
DRR006523Root Summer glycyrrhizin low producing strain10.697
DRR006524Root Summer glycyrrhizin low producing strain10.793
DRR006525Leaf Summer glycyrrhizin high producing strain14.330
DRR006526Leaf Summer glycyrrhizin high producing strain15.013

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)83.666
SRR2868004Drought Stress(Tissue:root)67.229
SRR2967015Control (Tissue:root)63.994

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.938
SRR9715740Leave24.406
SRR9715741Leave27.312
SRR9715739Root17.591
SRR9715742Root8.124
SRR9715743Root11.529

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h73.318
SRR8749028MeJA induced 9h66.555
SRR8749029MeJA induced 9h68.940
SRR8749030Uninduced47.163
SRR8749031Uninduced41.647
SRR8749032Uninduced29.655

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root38.640
SRR8400027Control-Root42.140

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved