Gene detail information of Glyur000073s00007757.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35987.1 | 1.00E-68 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_004509367.1 | 2.92E-125 | PREDICTED: calmodulin-lysine N-methyltransferase-like [Cicer arietinum] |
| trEMBL | tr|G7LC21|G7LC21_MEDTR | 3.00E-125 | Methyltransferase, putative {ECO:0000313|EMBL:AET03771.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00073 | 297 | 3897 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K18826 | CAMKMT | EC:2.1.1.60 | Lysine degradation | map00310 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000073s00007757.1 | PF10294.4 | Methyltransf_16 | 2 | 148 | 1.40E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.652 |
| SRR1783600 | control | 1.755 |
| SRR1783602 | moderate drought stress | 1.317 |
| SRR1811619 | moderate drought stress | 1.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.319 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.114 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.001 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.964 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.333 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.336 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.245 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.961 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.724 |
| SRR2967015 | Control (Tissue:root) | 4.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.682 |
| SRR9715740 | Leave | 7.495 |
| SRR9715741 | Leave | 5.139 |
| SRR9715739 | Root | 0.593 |
| SRR9715742 | Root | 2.597 |
| SRR9715743 | Root | 3.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.366 |
| SRR8749028 | MeJA induced 9h | 1.639 |
| SRR8749029 | MeJA induced 9h | 1.834 |
| SRR8749030 | Uninduced | 0.976 |
| SRR8749031 | Uninduced | 0.033 |
| SRR8749032 | Uninduced | 0.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.422 |
| SRR8400027 | Control-Root | 6.425 |