Gene detail information of Glyur000073s00007793.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36180.10Leucine-rich receptor-like protein kinase family protein
NRKHN00494.10Putative LRR receptor-like serine/threonine-protein kinase [Glycine soja]
COGYP_004775215.12.00E-56RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGS2|Y4361_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g36180 (Precursor)
trEMBLtr|V7CFQ1|V7CFQ1_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW28115.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00073192809196189-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000073s00007793.1PF08263.7LRRNT_218563.50E-10
Glyur000073s00007793.1PF13855.1LRR_83954538.60E-12
Glyur000073s00007793.1PF13855.1LRR_84915494.30E-08
Glyur000073s00007793.1PF13855.1LRR_86366941.40E-06
Glyur000073s00007793.1PF00069.20Pkinase83010505.10E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.446
SRR1783600control0.495
SRR1783602moderate drought stress0.597
SRR1811619moderate drought stress0.615

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.899
DRR006520Root Summer glycyrrhizin high producing strain1.903
DRR006521Root Winter glycyrrhizin high producing strain0.041
DRR006522Root Winter glycyrrhizin high producing strain0.032
DRR006523Root Summer glycyrrhizin low producing strain1.665
DRR006524Root Summer glycyrrhizin low producing strain1.552
DRR006525Leaf Summer glycyrrhizin high producing strain0.356
DRR006526Leaf Summer glycyrrhizin high producing strain0.356

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.957
SRR2868004Drought Stress(Tissue:root)0.398
SRR2967015Control (Tissue:root)0.690

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.217
SRR9715740Leave0.121
SRR9715741Leave0.078
SRR9715739Root0.490
SRR9715742Root0.640
SRR9715743Root0.663

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.168
SRR8749028MeJA induced 9h0.079
SRR8749029MeJA induced 9h0.036
SRR8749030Uninduced0.049
SRR8749031Uninduced0.022
SRR8749032Uninduced0.051

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.914
SRR8400027Control-Root1.011

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved