Gene detail

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Gene detail information of Glyur000073s00007800.2

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT4G36195.3	Serine carboxypeptidase S28 family protein
NR	XP_004509337.1	PREDICTED: probable serine protease EDA2-like [Cicer arietinum]
Swissprot	tr\|Q1PF50\|EDA2_ARATH	Probable serine protease EDA2 (Precursor)
trEMBL	tr\|C6TKC9\|C6TKC9_SOYBN	Putative uncharacterized protein {ECO:0000313\|EMBL:ACU23369.1}

Sequence

Transcript Sequence

>Glyur000073s00007800.2
ATGGGTCCCAAATCATTACTAGTGAATGACAATGAAGCAAGAGGAGCTGTCAACCCCACACTGGCTATGAAGCTTGTGGCTGAGAACAATGAAATGAAAAGTGAAAGGGTTAGAGTTGAATTATGCGTCCGCTTTGTGATGCTTGTGAGAGTGCCGCTGCTATTGTTTTTTGTGCTGCTGATGAGGCTGCGCTTTGCCATGCCTGTTCACATGTGTAATAAGCTAGCTAGCAGGCATGTAAGGGTTGGTCTCAAAAGTCCAAGTGATGTGCCTCGCTGTGACATTTGTGAGAATGCACCTGCTTTCTTCTATTGCGAGACAGATGGAAGTTCCCTTTGTTTGCAGTGTGATATGATGGTTCATGTTGGAGGTAAAAGAAAGCATGAAAGATATCTTCTTTTTAGGCAGAAAGTTGAGTTTCCAGGAGATAAACCTGGTCATGCAGAAAACCCAGCTTCACAGCCTCTGGACCCAAGTGAGACTAAAGGGGGACAAAATTCACTGCCTAGAACAAAAATGGGAGAGAAACAACAAAATCACAGGGTGCCTTTGGTTCTGTCACCAGAACCTGATGCTGATGGGCATGCCATTGGGGAAGCTAAAATGATAGATTTGAACATGAAGCCTCACAGAATACATGAACACACATCAAATAATCAGAATCGTGAGATTGCAACAAGAAGCAACGAGGAGGACGATGAGAGAGGGGAAGGGTAGTATGGGATGGGCAGCGTCATGGTTGTTGTTCCTGATTCTGTCTTTGGCGGCGGTGTCGTGCGTATTCGCATTCGTTCCACCTCGTACGCTGCTCAATAACTTGTCTGAGGGCAAAATCCTCACCAATGAGGAGCTCTGGTTCAATCAGACCCTCGATCACTTCTCTCCCTATGATCACCGTCAATTCCGGCAACGTTACTACGAGTTCCTAGACTATTTCCGGGTTCCTGATGGTCCAATTTTCTTGGTGATATGTGGGGAAGGTCCATGCAATGGGATAGCAAATGACTATATTGGTGTACTGGCNAAGAAGTTTGGAGCAGCTTTGGTTTCTCTTGAACATCGCTATTATGGAAAGAGTTCCCCCTTTGATTCTTTGGCAACAGAAAATTTGAAATATCTTTCATCCAAGCAGGCACTCTTTGATTTGGCTGTTTTTCGCCAGTATTATCAGGATTCTTTAAATGCAAAGCTTAATAGAAGCGAAGTTGAAAATCCCTGGTTCTTTTTTGGTGGCTCATACCCTGGAGCACTCAGTGCATGGTTCCGTCTTAAGTTTCCCCATTTAACATGTGGAAGTCTTGCAAGTTCTGCAGTTGTTCTTGCTGTTTATAACTACACAGAATTTGATCAACAGATCGGTGAGTCAGCAGGTGCTGAGTGTAAAGCAGCATTACAAGAAACTACTCAACTCATTGAAAAAAATCTTTCAACCAATGGAAAGGCACTGAGGGCNTATTTTAATGCAGATGATCTTGAAATTGATGGAGACTTCATGTATTTTCTGGCTGATGCTGCTGTTATAGCGTTTCAATATGGAAATCCAGATAAATTATGCAAGCCTTTGGTTGAAGCAAAGAAGGATGNGAAGGATTTGGTGGATGCTTATGCCAAATATGTCAAAGAGTACTACGTTGGAACCTTTGGNGTAAATGTACAAACTTATGACCAGAAGTATTTGAAAAAAACTGCAATTGGTGAAGACAGTTCTGCTCGATTATGGTGGTTTCAAGTTTGCACTGAAGTTGCNTACTTTCAGGTGGCTCCCTCAAATGATAGCATACGTTCCTCAAAAGTTGACACAAAGTATCATTTGGACCTTTGCAAAAATGTCTTTGGAGAGGGCATCTTTCCTGATGTCGATGCAACTAATTTATACTATGGAGGCACAAAAATTGCTGGTTCAAAAATAATATTTACAAATGGCTCACAGGATCCTTGGCGTCATGCATCTAAACAAATTTCATCCCCTGATATGCCTTCCTACACTATCACATGTTATAATTGTGGCCATTGTACTGATATGCGAGGGTGTCCTCAAGCTCCATTGGTCCTTGAAGGTAATGAGAAGAACTGCACTTCCCCTGATGCAGTTCACAAAGTAAGGCAAAAGATTCAAGAACAAATGGACTTATGGCTATCTGAGTGCCAAAACACAGGCTGGAGTTTTATATGATTATTTGCATGTGAGGTGCATGATGTACAATAACTTGGCCTGATTTCTGGTAGTTCTTCCTTTACCAGATAGTTATGACTGCTCGAAATATATTATCATTACTTATCACCTCTGTATAAACTGACCAAACCTAAGGCAGAACATATGTCATGTGTAGATAGAATGCCTTTCCTTAAGACATTCGTCTATTGAGTTATAGCATGCTAATTTCATGGCCAGGCACCCNGGCTACTCCTACCATTTATTGTTCATTAACCTTTAGCCTAATCCTGCTGTTGTCTATTTAGTCATTGTTTCTCCCCCTTCCCCAACAGTGTTCACTCACTTATTCCTTGCTCCAACAATTTTTGGGCATGATAAGAAGAAAATTGTTCTTAAAAAGGCATTGATCAAAGCCTTTACTTTAAAATATTTAGGGTTATTCTACCAAATTCTTGGAATGAATATCACTTGNGATTATTTCATAGAGATTATTGTGGCTATTTCAAGAGCAAAACATCGAGAAAATCCTTGAGATTTAATATGCATAAGGTCGAGCCAGGGTTTTTATTTTTGGTCAACAGCCAGGGAGTTTTAGTTGAGTNAGAAGCAAAGCCCAACAAGTGAATCCTTTTTATATTAAGAGAGCCATTATAAATCGTGCTTCATACTAGAGACATTTTTGTTTGGATCACAAAATTCTATGACTTCTCTCTTTCGCATTGAAGGGGGGAAGGGTTTCCCACATTTAAAATCNTGGTTTTATTCTT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00073	212386	223022	+

Gene family

Gene family	subfamily
Transcription Factors Family	Orphans
EAR motif-containing Proteins	Orphans

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0005622 intracellular

molecular_function GO:0008270 zinc ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000073s00007800.2	PF00643.19	zf-B_box	89	129	1.60E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	39.935
SRR1783600	control	40.040
SRR1783602	moderate drought stress	49.756
SRR1811619	moderate drought stress	49.586

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	40.136
DRR006520	Root Summer glycyrrhizin high producing strain	39.722
DRR006521	Root Winter glycyrrhizin high producing strain	66.254
DRR006522	Root Winter glycyrrhizin high producing strain	64.379
DRR006523	Root Summer glycyrrhizin low producing strain	37.635
DRR006524	Root Summer glycyrrhizin low producing strain	37.678
DRR006525	Leaf Summer glycyrrhizin high producing strain	35.153
DRR006526	Leaf Summer glycyrrhizin high producing strain	35.045

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	42.879
SRR2868004	Drought Stress(Tissue:root)	41.540
SRR2967015	Control (Tissue:root)	38.285

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	40.955
SRR9715740	Leave	49.131
SRR9715741	Leave	50.888
SRR9715739	Root	12.194
SRR9715742	Root	33.168
SRR9715743	Root	33.035

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	34.617
SRR8749028	MeJA induced 9h	29.220
SRR8749029	MeJA induced 9h	33.601
SRR8749030	Uninduced	34.261
SRR8749031	Uninduced	21.562
SRR8749032	Uninduced	22.092

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	55.470
SRR8400027	Control-Root	50.731