Gene detail information of Glyur000073s00007816.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36250.11.00E-174aldehyde dehydrogenase 3F1
NRXP_003547955.10PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max]
COGYP_007068020.18.00E-137aldehyde dehydrogenase [Calothrix sp. PCC 7507]
Swissprottr|Q70E96|AL3F1_ARATH0Aldehyde dehydrogenase family 3 member F1
trEMBLtr|I1MN90|I1MN90_SOYBN0Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00073287761291136+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00128ALDH EC:1.2.1.3 Glycolysis / Gluconeogenesis map00010
Ascorbate and aldarate metabolismmap00053
Pyruvate metabolismmap00620
Fatty acid degradationmap00071
Glycerolipid metabolismmap00561
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Arginine and proline metabolismmap00330
Histidine metabolismmap00340
Tryptophan metabolismmap00380
beta-Alanine metabolismmap00410
Insect hormone biosynthesismap00981
Limonene and pinene degradationmap00903
Chloroalkane and chloroalkene degradationmap00625


Gene Ontology

biological_process

GO:0006081  cellular aldehyde metabolic process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004030  aldehyde dehydrogenase [NAD(P)+] activity

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000073s00007816.1PF00171.17Aldedh134161.10E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.494
SRR1783600control1.590
SRR1783602moderate drought stress1.125
SRR1811619moderate drought stress1.090

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.251
DRR006520Root Summer glycyrrhizin high producing strain0.234
DRR006521Root Winter glycyrrhizin high producing strain0.502
DRR006522Root Winter glycyrrhizin high producing strain0.254
DRR006523Root Summer glycyrrhizin low producing strain0.545
DRR006524Root Summer glycyrrhizin low producing strain0.494
DRR006525Leaf Summer glycyrrhizin high producing strain7.104
DRR006526Leaf Summer glycyrrhizin high producing strain7.151

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.054
SRR2868004Drought Stress(Tissue:root)0.182
SRR2967015Control (Tissue:root)0.045

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.416
SRR9715740Leave6.035
SRR9715741Leave8.423
SRR9715739Root0.539
SRR9715742Root1.708
SRR9715743Root1.318

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.067
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.096
SRR8749030Uninduced0.000
SRR8749031Uninduced0.175
SRR8749032Uninduced0.098

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.637
SRR8400027Control-Root1.313

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved