Gene detail information of Glyur000073s00007821.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19790.2 | 6.00E-49 | SHI-related sequence 7 |
| NR | XP_004509324.1 | 1.60E-133 | PREDICTED: uncharacterized protein LOC101509349 [Cicer arietinum] |
| Swissprot | tr|Q9FXH7|SRS7_ARATH | 3.00E-71 | Protein SHI RELATED SEQUENCE 7 |
| trEMBL | tr|V7CD60|V7CD60_PHAVU | 5.00E-131 | Uncharacterized protein {ECO:0000313|EMBL:ESW28089.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00073 | 341488 | 343222 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SRS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000073s00007821.1 | PF05142.7 | DUF702 | 116 | 277 | 2.20E-64 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.164 |
| SRR1783600 | control | 1.246 |
| SRR1783602 | moderate drought stress | 1.384 |
| SRR1811619 | moderate drought stress | 1.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.135 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.113 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.560 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.526 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.329 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.598 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.364 |
| SRR2967015 | Control (Tissue:root) | 4.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.340 |
| SRR9715740 | Leave | 0.625 |
| SRR9715741 | Leave | 0.559 |
| SRR9715739 | Root | 3.482 |
| SRR9715742 | Root | 3.175 |
| SRR9715743 | Root | 2.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.727 |
| SRR8749028 | MeJA induced 9h | 1.841 |
| SRR8749029 | MeJA induced 9h | 4.665 |
| SRR8749030 | Uninduced | 0.480 |
| SRR8749031 | Uninduced | 0.411 |
| SRR8749032 | Uninduced | 0.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.556 |
| SRR8400027 | Control-Root | 3.663 |