Gene detail information of Glyur000073s00007822.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47800.12.00E-123Galactose mutarotase-like superfamily protein
NRXP_004508757.10PREDICTED: aldose 1-epimerase-like isoform X1 [Cicer arietinum]
COGYP_004271367.12.00E-89aldose 1-epimerase [Planctomyces brasiliensis DSM 5305]
trEMBLtr|I3SCY4|I3SCY4_LOTJA0Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00073352430354424+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01785galM, GALM EC:5.1.3.3 Glycolysis / Gluconeogenesis map00010
Galactose metabolismmap00052


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0019318  hexose metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000073s00007822.1PF01263.15Aldose_epim303509.00E-88


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.920
SRR1783600control1.995
SRR1783602moderate drought stress3.733
SRR1811619moderate drought stress3.723

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.610
DRR006520Root Summer glycyrrhizin high producing strain0.560
DRR006521Root Winter glycyrrhizin high producing strain0.837
DRR006522Root Winter glycyrrhizin high producing strain0.950
DRR006523Root Summer glycyrrhizin low producing strain1.139
DRR006524Root Summer glycyrrhizin low producing strain1.141
DRR006525Leaf Summer glycyrrhizin high producing strain0.775
DRR006526Leaf Summer glycyrrhizin high producing strain0.767

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.899
SRR2868004Drought Stress(Tissue:root)0.482
SRR2967015Control (Tissue:root)0.258

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.313
SRR9715740Leave0.556
SRR9715741Leave0.239
SRR9715739Root1.302
SRR9715742Root0.730
SRR9715743Root0.607

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.960
SRR8749028MeJA induced 9h10.487
SRR8749029MeJA induced 9h4.206
SRR8749030Uninduced10.020
SRR8749031Uninduced7.756
SRR8749032Uninduced14.559

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.308
SRR8400027Control-Root4.753

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved