Gene detail information of Glyur000073s00007829.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G47640.3 | 2.00E-32 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_004508752.1 | 6.37E-140 | PREDICTED: transcription factor bHLH47-like [Cicer arietinum] |
| Swissprot | tr|Q9SN74|BH047_ARATH | 3.00E-60 | Transcription factor bHLH47 |
| trEMBL | tr|B7FJ19|B7FJ19_MEDTR | 5.00E-124 | Putative uncharacterized protein {ECO:0000313|EMBL:ACJ84748.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00073 | 384454 | 387060 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.443 |
| SRR1783600 | control | 11.475 |
| SRR1783602 | moderate drought stress | 14.054 |
| SRR1811619 | moderate drought stress | 13.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.675 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.425 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.106 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.421 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 51.431 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 51.370 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.161 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 16.640 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.395 |
| SRR2967015 | Control (Tissue:root) | 20.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 39.739 |
| SRR9715740 | Leave | 46.006 |
| SRR9715741 | Leave | 43.310 |
| SRR9715739 | Root | 19.982 |
| SRR9715742 | Root | 31.367 |
| SRR9715743 | Root | 30.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.209 |
| SRR8749028 | MeJA induced 9h | 37.251 |
| SRR8749029 | MeJA induced 9h | 40.137 |
| SRR8749030 | Uninduced | 47.327 |
| SRR8749031 | Uninduced | 16.550 |
| SRR8749032 | Uninduced | 27.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 19.074 |
| SRR8400027 | Control-Root | 23.727 |