Gene detail information of Glyur000073s00007830.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G47620.1 | 3.00E-47 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 |
| NR | XP_007155318.1 | 1.94E-175 | hypothetical protein PHAVU_003G190900g [Phaseolus vulgaris] |
| Swissprot | tr|Q93Z00|TCP14_ARATH | 2.00E-64 | Transcription factor TCP14 |
| trEMBL | tr|V7CAU9|V7CAU9_PHAVU | 7.00E-176 | Uncharacterized protein {ECO:0000313|EMBL:ESW27312.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00073 | 402292 | 403557 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | TCP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000073s00007830.1 | PF03634.8 | TCP | 89 | 196 | 3.60E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.311 |
| SRR1783600 | control | 20.919 |
| SRR1783602 | moderate drought stress | 46.206 |
| SRR1811619 | moderate drought stress | 46.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.896 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.262 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.359 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.253 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.437 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.548 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.218 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.793 |
| SRR2868004 | Drought Stress(Tissue:root) | 22.546 |
| SRR2967015 | Control (Tissue:root) | 29.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 21.887 |
| SRR9715740 | Leave | 14.859 |
| SRR9715741 | Leave | 18.341 |
| SRR9715739 | Root | 20.847 |
| SRR9715742 | Root | 21.496 |
| SRR9715743 | Root | 23.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.056 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.243 |
| SRR8400027 | Control-Root | 13.952 |