Gene detail information of Glyur000074s00005523.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G48600.20S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NRXP_003525185.10PREDICTED: phosphoethanolamine N-methyltransferase-like [Glycine max]
COGYP_007206765.16.00E-61methyltransferase family protein [Singulisphaera acidiphila DSM 18658]
Swissprottr|Q9M571|PEAMT_SPIOL0Phosphoethanolamine N-methyltransferase
trEMBLtr|I1K5B7|I1K5B7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G33790.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000745014255728-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05929E2.1.1.103, NMT EC:2.1.1.103 Glycerophospholipid metabolism map00564


Gene Ontology

biological_process

GO:0006656  phosphatidylcholine biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0000234  phosphoethanolamine N-methyltransferase activity

GO:0008168  methyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000074s00005523.1PF08241.7Methyltransf_111282269.30E-13
Glyur000074s00005523.1PF13489.1Methyltransf_233424961.30E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control104.337
SRR1783600control105.189
SRR1783602moderate drought stress55.590
SRR1811619moderate drought stress55.252

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain65.249
DRR006520Root Summer glycyrrhizin high producing strain63.739
DRR006521Root Winter glycyrrhizin high producing strain475.596
DRR006522Root Winter glycyrrhizin high producing strain461.234
DRR006523Root Summer glycyrrhizin low producing strain13.856
DRR006524Root Summer glycyrrhizin low producing strain13.704
DRR006525Leaf Summer glycyrrhizin high producing strain118.583
DRR006526Leaf Summer glycyrrhizin high producing strain118.957

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)151.754
SRR2868004Drought Stress(Tissue:root)100.518
SRR2967015Control (Tissue:root)71.611

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave66.034
SRR9715740Leave34.520
SRR9715741Leave35.606
SRR9715739Root14.653
SRR9715742Root57.795
SRR9715743Root50.669

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.152
SRR8749028MeJA induced 9h12.216
SRR8749029MeJA induced 9h14.921
SRR8749030Uninduced3.861
SRR8749031Uninduced2.585
SRR8749032Uninduced1.831

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root222.020
SRR8400027Control-Root247.202

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved