Gene detail information of Glyur000074s00005545.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G18160.10Protein kinase superfamily protein
NRXP_003525192.10PREDICTED: serine/threonine-protein kinase EDR1-like isoformX2 [Glycine max]
COGYP_001958461.12.00E-30hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FPR3|EDR1_ARATH3.00E-115Serine/threonine-protein kinase EDR1
trEMBLtr|I1K5D0|I1K5D0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G33910.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00074177201185615-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000074s00005545.1PF14381.1EDR11403461.30E-71
Glyur000074s00005545.1PF07714.12Pkinase_Tyr7378412.00E-19
Glyur000074s00005545.1PF07714.12Pkinase_Tyr8439556.50E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.237
SRR1783600control10.316
SRR1783602moderate drought stress11.200
SRR1811619moderate drought stress11.153

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.157
DRR006520Root Summer glycyrrhizin high producing strain7.914
DRR006521Root Winter glycyrrhizin high producing strain2.003
DRR006522Root Winter glycyrrhizin high producing strain1.987
DRR006523Root Summer glycyrrhizin low producing strain8.159
DRR006524Root Summer glycyrrhizin low producing strain7.753
DRR006525Leaf Summer glycyrrhizin high producing strain5.991
DRR006526Leaf Summer glycyrrhizin high producing strain5.841

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.514
SRR2868004Drought Stress(Tissue:root)27.313
SRR2967015Control (Tissue:root)31.780

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.067
SRR9715740Leave17.389
SRR9715741Leave20.886
SRR9715739Root2.173
SRR9715742Root10.606
SRR9715743Root9.244

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.079
SRR8749028MeJA induced 9h9.265
SRR8749029MeJA induced 9h4.952
SRR8749030Uninduced5.664
SRR8749031Uninduced4.916
SRR8749032Uninduced4.111

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.457
SRR8400027Control-Root18.341

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved