Gene detail information of Glyur000074s00005574.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18180.1 | 1.00E-102 | Glycosyltransferase family 61 protein |
| NR | XP_003631054.1 | 0 | Glycosyltransferase, putative [Medicago truncatula] |
| trEMBL | tr|G7LCG2|G7LCG2_MEDTR | 0 | Glycosyltransferase family 61 protein {ECO:0000313|EMBL:AET05530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00074 | 325931 | 327991 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT61 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000074s00005574.1 | PF04577.9 | DUF563 | 134 | 329 | 1.70E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.966 |
| SRR1783600 | control | 4.107 |
| SRR1783602 | moderate drought stress | 2.835 |
| SRR1811619 | moderate drought stress | 2.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.086 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.086 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.072 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 25.610 |
| SRR2868004 | Drought Stress(Tissue:root) | 14.269 |
| SRR2967015 | Control (Tissue:root) | 12.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.053 |
| SRR9715740 | Leave | 0.018 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 1.426 |
| SRR9715742 | Root | 2.179 |
| SRR9715743 | Root | 2.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.322 |
| SRR8749028 | MeJA induced 9h | 0.002 |
| SRR8749029 | MeJA induced 9h | 0.154 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.023 |
| SRR8749032 | Uninduced | 0.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.124 |
| SRR8400027 | Control-Root | 6.627 |