Gene detail information of Glyur000075s00007150.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36370.1 | 0 | ubiquitin-protein ligases |
| NR | XP_004494153.1 | 0 | PREDICTED: BTB/POZ domain-containing protein FBL11-like [Cicer arietinum] |
| Swissprot | tr|Q8S8F2|FBL11_ARATH | 0 | BTB/POZ domain-containing protein FBL11 |
| trEMBL | tr|G7L600|G7L600_MEDTR | 0 | Ubiquitin-protein ligase {ECO:0000313|EMBL:AES81997.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00075 | 21656 | 33012 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | BTB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000075s00007150.2 | PF00651.26 | BTB | 49 | 135 | 2.10E-05 |
| Glyur000075s00007150.2 | PF07707.10 | BACK | 157 | 258 | 3.60E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.984 |
| SRR1783600 | control | 3.885 |
| SRR1783602 | moderate drought stress | 5.908 |
| SRR1811619 | moderate drought stress | 6.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.423 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.404 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.268 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.320 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.204 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.186 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.512 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 9.633 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.756 |
| SRR2967015 | Control (Tissue:root) | 18.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 9.044 |
| SRR9715740 | Leave | 11.304 |
| SRR9715741 | Leave | 11.401 |
| SRR9715739 | Root | 0.874 |
| SRR9715742 | Root | 4.918 |
| SRR9715743 | Root | 3.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.424 |
| SRR8749028 | MeJA induced 9h | 6.414 |
| SRR8749029 | MeJA induced 9h | 2.400 |
| SRR8749030 | Uninduced | 2.947 |
| SRR8749031 | Uninduced | 1.660 |
| SRR8749032 | Uninduced | 2.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.905 |
| SRR8400027 | Control-Root | 11.438 |